Volcano Plot: Differential Gene Expression
Interactive Table: Differential Gene Expression
Select Cell Type & Phenotype Status
Activated Stellate
Alpha
Beta
Delta
Ductal
Endothelial
Macrophage
Quiescent Stellate
Tcells
Acinar Basal
Acinar High Enzyme
Acinar Signal
Acinar Signal Differential
Select volcano plot axes:
Input column for significance (y axis)
pvalue
Input column for effect size (x axis)
log2FoldChange
Set significance and effect size thresholds:
Set significance threshold
Label features of interest:
Select input column for Gene label
Gene
Customize plot:
Show significance threshold line
Show effect size threshold line
Color significantly different features
Specify legend title
Show labels for significant genes
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Download Results
Download Deseq Results
Threshold for what is considered differentially expressed is set in Volcano Plot tab by using the significance and effect size sliders
Show only significantly different features